Occurrence, Identification, and Pathogenicity of Fusarium spp. Associated with Tomato Wilt in Mexico
DOI:
https://doi.org/10.15835/nbha46211095Keywords:
characterization, Fusarium oxysporum complex, genotypes, ITS and EF-1?, phylogenetic tree, tomatoAbstract
Fusarium wilt is considered as one of the most important diseases that affects tomato (Solanum lycopersicum L.) cultivation. The objective of this study was to identify and characterize Fusarium species with the potential to cause tomato wilt using morphological and molecular approaches, in order to generate the necessary information to achieve effective control of this disease. Fusarium isolates were found associated with commercial grown cultivars with disease incidence ranging from 10 to 85%. Forty isolates were identified by morphological characteristics as Fusarium oxysporum (38) and as Fusarium sp. (2). The isolates were evaluated for their pathogenicity on healthy tomato seedlings, which presented root rot at 20–35 days after inoculation. Fifteen of the most pathogenic isolates were analyzed with the internal transcribed spacer (ITS) region of DNA and the partial sequence of the translation elongation factor 1α (EF-1α). Isolates associated with tomato wilt, were identified molecularly as Fusarium oxysporum (13), Fusarium circinatum (1), and Fusarium andiyazi (1). Both analysis revealed that the mayor agent of tomato wilt in Mexico was F. oxysporum. This finding provides relevant information on tomato wilt in Mexico to decide the proper control methods for the pathogen.
References
Ajit NS, Verma R, Shanmugam V (2006). Extracellular chitinases of fluorescent Pseudomonads antifungal to F. oxysporum f.sp. dianthi causing carnation wilt. Current Microbiology 52:310-316.
Akanmu AO, Abiala MA, Odebode AC (2013). Pathogenic effect of soil-borne Fusarium species on the growth of millet seedlings. World Journal of Agricultural Sciences 9:60-68.
Aoki T, O’Donnell K, Geiser DM (2014). Systematics of key phytopathogenic Fusarium species: Current status and future challenges. Journal of General Plant Pathology 80:189-201.
Apodaca SMA, Zavaleta ME, Osada KS, García ER, Valenzuela UJG (2004). Hospedantes asintomáticos de Fusarium oxysporum Schlechtend. f. sp. radicis-lycopersici W.R. Jarvis y Shoemaker en Sinaloa, México. Revista Mexicana de Fitopatología 22:7-13.
Arie T, Takahashi H, Kodama M, Teraoka T (2007). Tomato as a model plant for plant-pathogen interactions. Plant Biotechnology 24:135-147.
Bashyal BM, Aggarwal R (2013). Molecular identification of Fusarium species associated with bakanae disease of rice (Oryza sativa) in India. Indian Journal of Agricultural Sciences 83:71-76.
Booth C (1971). The genus Fusarium. Commonwealth Mycological Institute, Kew, Surrey, England.
Britz H, Coutinho TA, Wingeld MJ, Marasas WFO (2002). Validation of the description of Gibberella circinata and morphological differentiation of the anamorph Fusarium circinatum. Sydowia 54:9-22.
Cai L, Giraud T, Zhang N, Begerow D, Cai G, Shivas GR (2011). The evolution of species concepts and species recognition criteria in plant pathogenic fungi. Fungal Diversity 50:121.
Campbell CL, Madden LV (1990). Introduction to plant disease epidemiology. John Wiley and Sons, Inc, New York, NY, USA.
Chehri K, Salleh B, Zakaria L (2015). Morphological and phylogenetic analysis of Fusarium solani species complex in Malaysia. Microbial Ecology 69:457-471.
Correia CK, Câmara SM, Barbosa GM, Sales RJ, Brisach AC, Gramaje D, … Michereff SJ (2013). Fungal trunk pathogens associated with table grape decline in Northeastern Brazil. Phytopathologia Mediterranea 53:380-388.
Daami-Remadi M (2006). Etude des fusarioses de la pomme de terre [Study of fusariosis of the potato]. Thèse, Institut Supérieur 424 Agronomique de Chott-Mariem, Tunisie.
El-Kazzaz MK, El-Fadly GB, Hassan MAA, El-Kot GAN (2008). Identification of some Fusarium spp. using Molecular Biology Techniques, Egypt Journal of Phytopathology 36:57-69.
FAOSTAT (2015). Database on Agriculture. FAO - Food and Agriculture Organization of the United Nations.
Gargouri-Kammoun L, Gargouri S, Rezgui S, Trifi M, Bahri N, Hajlaoui M R (2009). Pathogenicity and Aggressiveness of Fusarium and Microdochium on Wheat Seedlings under Controlled Conditions. Tunisian Journal of Plant Protection 2:135-144.
Giurgiu MR, Dumitras A, Morar G, Scheewe P, Schröder GF (2017). A study on the biological control of Fusarium oxysporum using Trichoderma spp., on soil and rockwool substrates in controlled environment. Notulae Botanicae Horti Agrobotanici Cluj-Napoca 46(1):260-269.
Hernández-Martínez HR, Benítez LA, Escalante BF, Velázquez EJ, Aspeytia SD, Mendoza MIE, Ochoa LAL (2014). Razas de Fusarium oxysporum f. sp. lycopersici en predios tomateros en San Luis Potosí. Revista Mexicana de Ciencias Agrícolas 5:1169-1178.
Hsuan HM, Salleh B, Zakaria L (2011). Molecular identification of Fusarium species in Gibberella fujikuroi species complex from rice, sugarcane and maize from Peninsular Malaysia. International Journal of Molecular Sciences 12:6722-6732.
Inami K, Kashiwa T, Kawabe M, Onokubo-Okabe A, Ishikawa N, Pérez RE, … Arie T (2014). The tomato wilt fungus Fusarium oxysporum f. sp. lycopersici shares common ancestors with nonpathogenic F. oxysporum isolated from wild tomatoes in the Peruvian Andes. Microbes and Environments 29:200-210.
Irzykowska L, Bocianowski J, Wa?kiewicz A, Weber Z, Karolewski Z, Goli?ski P, Kostecki M, Irzykowski W (2012). Genetic variation of Fusarium oxysporum isolates forming fumonisin B1 and moniliformin. Journal of Applied Genetics 53:237-247.
Jiménez-Fernández D, Montes-Borregob M, Navas Cortés J, Jiménez-D??az R, Landab, BB (2010). Identification and quantification of Fusarium oxysporum in plants and soil by means of an improved specific and quantitative PCR assay. Applied Soil Ecology 46:372-362.
Joshi, M, Srivastava R, Sharma Prakash AK (2013). Isolation and characterization of Fusarium oxysporum, a wilt causing fungus, for its pathogenic and non-pathogenic nature in tomato (Solanum lycopersicum). Journal of Applied and Natural Science 5:108-117.
Klaasen JA, Nelson PE (1996). Identification of a mating population, Gibberella nygamai sp. nov., within the Fusarium nygamai anamorph. Mycologia 88:965-969.
Klittich CJR, Leslie JF, Nelson PE, Marasas WFO (1997). Fusarium thapsinum (Gibberella thapsina): a new species in section Liseola from sorghum. Mycologia 89:643-652.
Lamrani K (2009). Etude de la biodiversité des moisissures nuisibles et utiles isolées à partir des Maâsra du Maroc [Study of the biodiversity of harmful and beneficial fungi isolated from the Maasra of Morocco]. Thése en Microbiologie, Université Mohamed V-Agdal Faculté des Sciences Rabat. No d’ordre: 2461.
Leslie JF, Summerell BA (2006). The Fusarium Laboratory Manual. Blackwell Publishing, Iowa, USA.
Leyva-Mir, SG, González-Solano CM, Rodríguez-Pérez JE, and Montalvo-Hernández D (2013). Behavior of advanced lines of tomato (Solanum lycopersicum L.) to phytopathogens at Chapingo, Mexico. Revista Chapingo Serie Horticultura 19:301-313.
Lima CS, Pfenning LH, Costa SS, Abreu LM, Leslie JF (2012). Fusarium tupiense sp. nov., a member of the Gibberella fujikuroi complex that causes mango malformation in Brazil. Mycologia 104:1408-1419.
Marzano M, Gallo A, Altomare C (2013). Improvement of biocontrol efficacy of Trichoderma harzianum vs. Fusarium oxysporum f. sp. lycopersici through UV-induced tolerance to fusaric acid. Biological Control 67:397-408.
Marín-Montes IM, Rodríguez-Pérez JE, Sahagún-Castellanos J, Hernandez-Ibañez L, Velasco-García AM (2016). Variación morfológica y molecular de 55 colectas de tomate nativo de México. Revista Chapingo Serie Horticultura 22:117-132.
Massee G (1895). The “Sleepy disease” of tomatoes. Garden Chronicles Series 3 17:707-708.
Marasas WFO, Lamprecht SC, Zeller KA, Leslie JF (2001). Fusarium andiyazi sp. nov., a new species from sorghum. Mycologia 93:1203-1210.
Morales-Rodríguez I, Yañez-Morales M, Silva-Rojas HV, García de los Santos G, Guzmán de Peña D (2007). Biodiversity of Fusarium species in Mexico associated with ear rot in maize, and their identification using a phylogenetic approach. Mycopathologia 163:31-39.
Nelson PE, Toussoun TA, Marasas WFO (1983). Fusarium Species: An Illustrated Manual for Identification. Pennsylvania State University Press, University Park, Pennsylvania, USA.
Nirenberg HI, O’Donnell K (1998) New Fusarium species and combinations within the Gibberella fujikuroi species complex. Mycologia 90:434-458.
Nirmaladevi D, Venkataramana M, Srivastava RK, Uppalapati SR, Gupta VK, Yli-Mattila T, … Chandra NS (2016). Molecular phylogeny, pathogenicity and toxigenicity of Fusarium oxysporum f. sp. lycopersici. Scientific Reports 6:21367.
O’Donnell K, Cigelnik E, Casper HH (1998). Molecular phylogenetic, morphological, and mycotoxin data support re-identification of the Quorn mycoprotein fungus as Fusarium venenatum. Fungal Genetics and Biology 23:57-67.
O’Donnell K, Cigelnik E, Nirenberg HI (1998). Molecular systematics and phylogeography of the Gibberella fujikuroi species. Mycologia 90:465-493.
Panthee DR, Chen F (2010). Genomics of fungal disease resistance in tomato. Current Genomics 11:30-39.
Parke JL, Grünwald NJ (2012). A systems approach for management of pests and pathogens of nursery crops. Plant Diseases 96:1236-1244.
Rodrigues AAC, Menezes M (2005). Identification and pathogenic characterization of endophytic Fusarium species from cowpea seeds. Mycopathologia 159:79-85.
SAS Institute Inc (2012). Base SAS® 9.3 Procedures Guide. Cary, NC: SAS Institute Inc.
Sato R, Araki T (1974). On the tomato root-rot disease occurring under vinyl-house conditions in southern Hokkaido. Annual Report of the Society of Plant Protection of North Japan 25:5-13.
Shahnazi S, Meon S, Vadamalai G, Ahmad K, Nejat N (2012). Morphological and molecular characterization of Fusarium spp. associated with yellowing disease of black pepper (Piper nigrum L.) in Malaysia. Journal of General Plant Pathology 78:160-169.
Siddique SS, Bhuiyan MKA, Momotaz R, Bari GMM, Rahman MH (2014). Cultural characteristics, virulence and In-vitro chemical control of Fusarium oxysporum f. sp. phaseoli of bush bean (Phaseolus vulgaris L.), The Agriculturists 12:103-110.
Singha MI, Kakoty Y, Unni GB, Das J, Kalita CM (2016). Identification and characterization of Fusarium sp. using ITS and RAPD causing Fusarium wilt of tomato isolated from Assam, North East India. Journal of Genetic Engineering and Biotechnology 14:99-105.
Sites JW, Marshall JC (2004). Operational criteria for delimiting species. Annual Review of Ecology Evolution and Systematics 35:199-227.
Staden R, Beal KF, Bonfield JK (1998). The Staden package, 1998. In: Misener S, Krawetz SA (Eds). Bioinformatics methods and protocols. Humana, New York pp 115-130.
Steenkamp ET, Wingfield BD, Desjardins AE, Marasas WFO, Wingfield MJ (2002). Cryptic Speciation in Fusarium subglutinans. Mycologia 94:1032-1043.
Steenkamp ET, Makhari OM, Coutinho TA, Wingfield BD, Wingfield MJ (2014). Evidence for a new introduction of the pitch canker fungus Fusarium circinatum in South Africa. Plant Pathology 63(3):530-538.
Steinkellner S, Mammerler R, Vierheilig H (2005). Microconidia germination of the tomato pathogen Fusarium oxysporum in the presence of root exudates. Journal of Plant Interactions 1:23-30.
Sweet CL, Gordon TR (2012). First report of grass species (Poaceae) as naturally occurring host of the pine pathogen Gibberella circinata. Plant Disease 96(6):908.
Takken F, Rep M (2010). The arms race between tomato and Fusarium oxysporum. Molecular Plant Pathology 11:309-314.
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011). MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28:2731-2739.
Tamura K, Nei M (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution 10:512-526.
Tanyolac B, Akkale C (2010). Screening of resistance genes to Fusarium root rot and Fusarium wilt diseases in F3 family lines of tomato (Lycopersicon esculentum) using RAPD and CAPs. African Journal of Biotechnology 9:2727-2730.
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997). The ClustalX Windows interface: flexible strategies for multiple alignment aided by quality analysis tools. Nucleic Acids Research 25:4876-4882.
Tivoli B, Deltour A, Molet D, Bedin P, Jouan B (1986). Mise en évidence de souches de Fusarium roseum var. sambucinum résistantes au thiabendazole, isolées à partir de tubercules de pomme de terre [Demonstration of Fusarium roseum var. sambucinum strains resistant to thiabendazole, isolated from potato tubers]. Agronomie 6:219-224.
Trabelsi R, Sellami H, Gharbi Y, Krid S, Cheffi M, Kammoun S, … Triki MA (2017). Morphological and molecular characterization of Fusarium spp. associated with olive trees dieback in Tunisia. Biotechnology 7:1.
Van Hove F, Waalwijk C, Logrieco A, Munaut F, Moretti A (2011). Gibberella musae (Fusarium musae) sp. nov., a recently discovered species from banana is sister to F. verticillioides. Mycologia 103:570-585.
White TJ, Bruns T, Lee S, Taylor J (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols: A guide to methods and applications. Innis MA, Gelfand DH, Sninsky JJ, White TJ (Eds). Academic Press, New York, USA 315-322.
Wulff EG, Sorensen JL, Lubeck M, Nielson KF, Thrane U, Trop J (2010). Fusarium spp. associated with rice Bakanae: ecology, genetic diversity, pathogenicity and toxigenicity. Environmental Microbiology 12(3):649-657.
Zainuddin M, Ain Izzati N, Baharuddin S (2010). Variability of Fusarium species associated with bakanae disease of rice based on virulence, vegetative and biological compatibility. Sydowia 62:89-104.
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Copyright (c) 2018 Micah R. ISAAC, Santos G. LEYVA-MIR, Jaime SAHAGÚN-CASTELLANOS, Kamila CÂMARA-CORREIA, Juan M. TOVAR-PEDRAZA, Juan E. RODRÍGUEZ-PÉREZ
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